nm000435 NEMAR-native dataset

Human medial temporal lobe iEEG during a visual working memory task (Boran et al.; DANDI 000575)

Intracranial EEG recordings from medial temporal lobe depth electrodes (amygdala, hippocampus, entorhinal and parahippocampal cortex) in patients with drug-resistant epilepsy performing a visual working memory change-detection task with set sizes of 1, 2, 4 or 6 items. The dataset is a BIDS-iEEG conversion of the continuous iEEG series released in NWB format on DANDI (000575), with corrected sampling rates, amplitude units, event tables and MNI electrode coordinates. It covers 11 participants, 12 sessions and 13 recordings.

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Issues GitHub

Download this dataset

Pick a method. Large datasets skip the zip; resume support depends on each file's storage type. Full download guide →

  1. Download archive (.zip) — 77.5 GB

    A single zip of the published version. Best for small/medium datasets.

    Download zip

  2. NEMAR CLI recommended

    Pulls the pinned version + annexed data and resumes cleanly. Install nemar-cli →

    nemar dataset download nm000435
  3. DataLad

    Clone the dataset repo and fetch file content on demand. Docs →

    datalad clone https://github.com/nemarDatasets/nm000435 nm000435
    cd nm000435 && datalad get .
  4. git-annex

    Plain git + git-annex against the dataset repo. Docs →

    git clone https://github.com/nemarDatasets/nm000435 nm000435
    cd nm000435 && git annex get .
  5. Direct files (wget / curl / rclone)

    Every file is listed by its stable manifest URL. Single-range requests and resume are currently supported for annex-backed entries; git-tracked files are served as full bodies. Real chunk-only byte delivery still awaits isolated, non-synthetic acceptance. Needs curl, jq, wget (or rclone/aria2c). Docs →

    curl -s https://data.nemar.org/nm000435/v1.0.0/manifest.json | jq -r '.[].url' > urls.txt
    wget -xc -i urls.txt

Compute on this dataset

Two routes today, with a third (in-browser one-click submission) landing soon.

  1. NeuroScience Gateway (NSG) portal.

    NSG runs EEGLAB / Brainstorm / MNE pipelines on supercomputing time donated by SDSC. Create an account, point a job at this dataset's S3 prefix (s3://nemar/nm000435), and submit.
    nsgportal.org →

  2. Local processing with nemar-cli.

    Pull the dataset to your machine and run any toolbox locally. Honors the published version pinning.

    npm install -g nemar-cli
    nemar dataset clone nm000435
    cd nm000435 && nemar dataset get
  3. Just the files.

    rclone, aria2c, or any HTTPS client works against data.nemar.org/nm000435/ — the manifest carries stable data-plane file URLs. Single-range requests are supported for annex-backed entries; git-tracked files are served as full bodies. Real chunk-only byte delivery remains under isolated acceptance.

Direct compute access is coming soon. One-click NSG submission from this page is scoped for a follow-up phase. Tracked on nemarOrg/website#6.

Citations

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    Files

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    Signal viewer

    How to use the data (for agentic research) license, citation, download commands

    What it is

    Modalities
    IEEG
    Participants
    11
    Size
    85.3 GB
    Tasks
    visualwm

    License and terms

    License
    CC-BY-4.0
    Recommended citation
    Boran, E., Hilfiker, P., Stieglitz, L., Hohenheim, J., Klaver, P., & Sarnthein, J. (2026). Human medial temporal lobe iEEG during a visual working memory task (Boran et al.; DANDI 000575) (Version v1.0.0) [Data set]. NEMAR. https://doi.org/10.82901/nemar.nm000435

    Where the bytes are

    Latest version (always current)
    https://data.nemar.org/nm000435/latest/

    How to download

    The dataset
    nemar dataset download nm000435 Clones and fetches in one step. Content under stimuli/ and derivatives/ is skipped by default because those trees can be large; add --stimuli --derivatives for the whole thing.
    A subset, one step
    nemar dataset download nm000435 --subjects sub-01,02 Also filters by --sessions, --tasks, --runs, --datatypes, --include and --exclude.
    A subset, step 1
    nemar dataset clone nm000435 Clones git-annex pointers only; fetches no file content. Creates ./nm000435.
    A subset, step 2
    cd nm000435 The get command below reads the clone's annex, so it only works from inside the clone.
    A subset, step 3
    nemar dataset get <files> Pulls the files you actually need. Skips stimuli/ and derivatives/ unless the path you ask for is under one of them.
    One small file
    https://data.nemar.org/nm000435/v1.0.0/participants.tsv A direct HTTPS fetch works for any single file.