nm000402 NEMAR-native dataset

Multi-Expert Seizure Annotation

Stereotactic EEG recordings of 78 seizures (44 spontaneous, 34 stimulation-induced) from 29 patients with drug-resistant epilepsy, recruited at the University of Pennsylvania and the Children's Hospital of Philadelphia. Three or five board-certified epileptologists independently annotated each seizure for onset time, onset channels, and channels seizing 10 seconds after onset. The BIDS-formatted data include electrode localizations, patient demographics, and clinical outcomes. They support benchmarking of automated seizure onset and spread detection against expert performance and comparison of spontaneous and stimulation-induced seizure networks.

IEEG
Issues GitHub

Download this dataset

Pick a method. Large datasets skip the zip and use the streaming methods below — all resumable. Full download guide →

  1. Download archive (.zip) — 5.4 GB

    A single zip of the published version. Best for small/medium datasets.

    Download zip

  2. NEMAR CLI recommended

    Pulls the pinned version + annexed data and resumes cleanly. Install nemar-cli → 

    nemar dataset download nm000402
  3. DataLad

    Clone the dataset repo and fetch file content on demand. Docs → 

    datalad clone https://github.com/nemarDatasets/nm000402 nm000402
cd nm000402 && datalad get .
  4. git-annex

    Plain git + git-annex against the dataset repo. Docs → 

    git clone https://github.com/nemarDatasets/nm000402 nm000402
cd nm000402 && git annex get .
  5. Direct files (wget / curl / rclone)

    Every file with a stable, range-resumable URL from the manifest. Needs curl, jq, wget (or rclone/aria2c). Docs → 

    curl -s https://data.nemar.org/nm000402/v1.0.0/manifest.json | jq -r '.[].bytes_url' > urls.txt
wget -xc -i urls.txt

Compute on this dataset

Two routes today, with a third (in-browser one-click submission) landing soon.

  1. NeuroScience Gateway (NSG) portal.

    NSG runs EEGLAB / Brainstorm / MNE pipelines on supercomputing time donated by SDSC. Create an account, point a job at this dataset's S3 prefix (s3://nemar/nm000402), and submit.
    nsgportal.org →

  2. Local processing with nemar-cli.

    Pull the dataset to your machine and run any toolbox locally. Honors the published version pinning. 

    npm install -g nemar-cli
nemar dataset clone nm000402
cd nm000402 && nemar dataset get
  3. Just the files.

    rclone, aria2c, or any HTTPS client works against data.nemar.org/nm000402/ — the manifest carries presigned S3 URLs.

Direct compute access is coming soon. One-click NSG submission from this page is scoped for a follow-up phase. Tracked on nemarOrg/website#6.

Citations

    Loading demographics…

    Files

    Loading file index…

    Signal viewer
    How to use the data (for agentic research) license, citation, download commands

    What it is

    Modalities
    IEEG
    Participants
    29
    Size
    7.95 GB
    Tasks
    ictal107374, ictal114973, ictal126735, ictal165399, ictal20694, ictal209153, ictal212899, ictal233275, ictal251098, ictal251120, ictal253214, ictal263028, ictal271748, ictal271899, ictal272461, ictal286026, ictal290006, ictal296207, ictal297659, ictal301581, ictal304944, ictal339135, ictal371979, ictal387681, ictal393496, ictal408565, ictal412046, ictal412267, ictal416768, ictal418859, ictal439029, ictal443897, ictal448880, ictal453842, ictal45666, ictal465564, ictal491462, ictal497084, ictal49987, ictal519177, ictal541692, ictal6474, ictal68657, ictal754436, stim10208, stim10640, stim1109, stim12337, stim12508, stim14638, stim15093, stim15516, stim159833, stim16147, stim17123, stim17184, stim17776, stim187227, stim20467, stim21077, stim2230, stim241395, stim2872, stim32467, stim32916, stim3860, stim4838, stim4966, stim6083, stim63986, stim6553, stim68881, stim71156, stim73007, stim8536, stim8576, stim87579, stim89587

    License and terms

    License
    CC-BY-4.0
    Recommended citation
    Ojemann, W. K., Zhou, D., Armstrong, C., Sinha, N., Litt, B., & Conrad, E. (2026). Multi-Expert Seizure Annotation (Version v1.0.0) [Data set]. NEMAR. https://doi.org/10.82901/nemar.nm000402
    Reference 1
    https://doi.org/10.21105/joss.01896
    Reference 2
    https://doi.org/10.1038/s41597-019-0105-7

    Where the bytes are

    Latest version (always current)
    https://data.nemar.org/nm000402/latest/
    This version (v1.0.0)
    https://data.nemar.org/nm000402/v1.0.0/

    How to download

    The dataset
    nemar dataset download nm000402 Clones and fetches in one step. Content under stimuli/ and derivatives/ is skipped by default because those trees can be large; add --stimuli --derivatives for the whole thing.
    A subset, one step
    nemar dataset download nm000402 --subjects sub-01,02 Also filters by --sessions, --tasks, --runs, --datatypes, --include and --exclude.
    A subset, step 1
    nemar dataset clone nm000402 Clones git-annex pointers only; fetches no file content. Creates ./nm000402.
    A subset, step 2
    cd nm000402 The get command below reads the clone's annex, so it only works from inside the clone.
    A subset, step 3
    nemar dataset get <files> Pulls the files you actually need. Skips stimuli/ and derivatives/ unless the path you ask for is under one of them.
    One small file
    https://data.nemar.org/nm000402/v1.0.0/participants.tsv A direct HTTPS fetch works for any single file.

    Assess fit without downloading

    Participants table
    https://data.nemar.org/nm000402/v1.0.0/participants.tsv
    Dataset description
    https://data.nemar.org/nm000402/v1.0.0/dataset_description.json
    Directory listing
    https://data.nemar.org/nm000402/v1.0.0/?format=json
    Catalog record
    https://api.nemar.org/datasets/nm000402