nm000399 NEMAR-native dataset

Thalamic local field potentials during reading aloud of words and nonwords (Wang et al., 2022): 11 essential tremor patients, DBS surgery (derivative: preprocessed epochs)

Preprocessed, epoched local field potentials from the ventral lateral thalamus of 11 essential tremor patients undergoing awake deep brain stimulation (DBS) surgery. Recordings were made from mapping-electrode macro rings or the implanted DBS lead while patients read aloud consonant-vowel-consonant words and nonwords. This derivative repackages the authors' Dryad release (non-re-referenced trials) into BIDS iEEG format, with trial tables and MNI electrode coordinates.

IEEG
Issues GitHub

Download this dataset

Pick a method. Large datasets skip the zip and use the streaming methods below — all resumable. Full download guide →

  1. Download archive (.zip) — 1.5 GB

    A single zip of the published version. Best for small/medium datasets.

    Download zip

  2. NEMAR CLI recommended

    Pulls the pinned version + annexed data and resumes cleanly. Install nemar-cli → 

    nemar dataset download nm000399
  3. DataLad

    Clone the dataset repo and fetch file content on demand. Docs → 

    datalad clone https://github.com/nemarDatasets/nm000399 nm000399
cd nm000399 && datalad get .
  4. git-annex

    Plain git + git-annex against the dataset repo. Docs → 

    git clone https://github.com/nemarDatasets/nm000399 nm000399
cd nm000399 && git annex get .
  5. Direct files (wget / curl / rclone)

    Every file with a stable, range-resumable URL from the manifest. Needs curl, jq, wget (or rclone/aria2c). Docs → 

    curl -s https://data.nemar.org/nm000399/v1.0.0/manifest.json | jq -r '.[].bytes_url' > urls.txt
wget -xc -i urls.txt

Compute on this dataset

Two routes today, with a third (in-browser one-click submission) landing soon.

  1. NeuroScience Gateway (NSG) portal.

    NSG runs EEGLAB / Brainstorm / MNE pipelines on supercomputing time donated by SDSC. Create an account, point a job at this dataset's S3 prefix (s3://nemar/nm000399), and submit.
    nsgportal.org →

  2. Local processing with nemar-cli.

    Pull the dataset to your machine and run any toolbox locally. Honors the published version pinning. 

    npm install -g nemar-cli
nemar dataset clone nm000399
cd nm000399 && nemar dataset get
  3. Just the files.

    rclone, aria2c, or any HTTPS client works against data.nemar.org/nm000399/ — the manifest carries presigned S3 URLs.

Direct compute access is coming soon. One-click NSG submission from this page is scoped for a follow-up phase. Tracked on nemarOrg/website#6.

Citations

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    Files

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    Signal viewer
    How to use the data (for agentic research) license, citation, download commands

    What it is

    Modalities
    IEEG
    Participants
    11
    Size
    1.48 GB
    Tasks
    reading

    License and terms

    License
    CC0-1.0
    Recommended citation
    Wang, D., Lipski, W. J., Bush, A., Chrabaszcz, A., Dastolfo-Hromack, C., Dickey, M. W., Fiez, J. A., & Richardson, R. M. (2026). Thalamic local field potentials during reading aloud of words and nonwords (Wang et al., 2022): 11 essential tremor patients, DBS surgery (derivative: preprocessed epochs) (Version v1.0.0) [Data set]. NEMAR. https://doi.org/10.82901/nemar.nm000399
    Reference
    https://doi.org/10.1101/2020.07.30.229898

    Where the bytes are

    Latest version (always current)
    https://data.nemar.org/nm000399/latest/
    This version (v1.0.0)
    https://data.nemar.org/nm000399/v1.0.0/

    How to download

    The dataset
    nemar dataset download nm000399 Clones and fetches in one step. Content under stimuli/ and derivatives/ is skipped by default because those trees can be large; add --stimuli --derivatives for the whole thing.
    A subset, one step
    nemar dataset download nm000399 --subjects sub-01,02 Also filters by --sessions, --tasks, --runs, --datatypes, --include and --exclude.
    A subset, step 1
    nemar dataset clone nm000399 Clones git-annex pointers only; fetches no file content. Creates ./nm000399.
    A subset, step 2
    cd nm000399 The get command below reads the clone's annex, so it only works from inside the clone.
    A subset, step 3
    nemar dataset get <files> Pulls the files you actually need. Skips stimuli/ and derivatives/ unless the path you ask for is under one of them.
    One small file
    https://data.nemar.org/nm000399/v1.0.0/participants.tsv A direct HTTPS fetch works for any single file.

    Assess fit without downloading

    Participants table
    https://data.nemar.org/nm000399/v1.0.0/participants.tsv
    Dataset description
    https://data.nemar.org/nm000399/v1.0.0/dataset_description.json
    Directory listing
    https://data.nemar.org/nm000399/v1.0.0/?format=json
    Catalog record
    https://api.nemar.org/datasets/nm000399