nm000363 NEMAR-native dataset

Human medial temporal lobe single units during a verbal working memory task (Boran et al.): spike times and waveforms aligned to OpenNeuro ds004752

This BIDS derivative dataset provides sorted single-unit (microwire) recordings from the human medial temporal lobe (hippocampus, entorhinal cortex, amygdala) of nine patients with drug-resistant focal epilepsy performing a modified Sternberg verbal working memory task. It contains 1526 units with spike times per trial, mean and standard deviation waveforms, electrode and anatomical mapping, and trial properties. Subject, session and trial labels are aligned to OpenNeuro ds004752 / NEMAR on004752, which hosts the scalp and intracranial EEG of the same patients.

IEEG
Issues GitHub

Download this dataset

Pick a method. Large datasets skip the zip and use the streaming methods below — all resumable. Full download guide →

  1. Download archive (.zip) — 12.9 GB

    A single zip of the published version. Best for small/medium datasets.

    Download zip

  2. NEMAR CLI recommended

    Pulls the pinned version + annexed data and resumes cleanly. Install nemar-cli → 

    nemar dataset download nm000363
  3. DataLad

    Clone the dataset repo and fetch file content on demand. Docs → 

    datalad clone https://github.com/nemarDatasets/nm000363 nm000363
cd nm000363 && datalad get .
  4. git-annex

    Plain git + git-annex against the dataset repo. Docs → 

    git clone https://github.com/nemarDatasets/nm000363 nm000363
cd nm000363 && git annex get .
  5. Direct files (wget / curl / rclone)

    Every file with a stable, range-resumable URL from the manifest. Needs curl, jq, wget (or rclone/aria2c). Docs → 

    curl -s https://data.nemar.org/nm000363/v1.0.0/manifest.json | jq -r '.[].bytes_url' > urls.txt
wget -xc -i urls.txt

Compute on this dataset

Two routes today, with a third (in-browser one-click submission) landing soon.

  1. NeuroScience Gateway (NSG) portal.

    NSG runs EEGLAB / Brainstorm / MNE pipelines on supercomputing time donated by SDSC. Create an account, point a job at this dataset's S3 prefix (s3://nemar/nm000363), and submit.
    nsgportal.org →

  2. Local processing with nemar-cli.

    Pull the dataset to your machine and run any toolbox locally. Honors the published version pinning. 

    npm install -g nemar-cli
nemar dataset clone nm000363
cd nm000363 && nemar dataset get
  3. Just the files.

    rclone, aria2c, or any HTTPS client works against data.nemar.org/nm000363/ — the manifest carries presigned S3 URLs.

Direct compute access is coming soon. One-click NSG submission from this page is scoped for a follow-up phase. Tracked on nemarOrg/website#6.

Citations

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    Files

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    Signal viewer
    How to use the data (for agentic research) license, citation, download commands

    What it is

    Modalities
    IEEG
    Participants
    9
    Size
    16.2 GB
    Tasks
    verbalWM

    License and terms

    License
    CC-BY-SA-4.0
    Note
    Derivatives must be shared under the same license (CC-BY-SA-4.0).
    Recommended citation
    Boran, E., Fedele, T., Steiner, A., Hilfiker, P., Stieglitz, L., Grunwald, T., & Sarnthein, J. (2026). Human medial temporal lobe single units during a verbal working memory task (Boran et al.): spike times and waveforms aligned to OpenNeuro ds004752 (Version v1.0.0) [Data set]. NEMAR. https://doi.org/10.82901/nemar.nm000363
    Reference 1
    https://doi.org/10.1126/sciadv.aav3687
    Reference 2
    https://doi.org/10.1371/journal.pone.0166598
    Reference 3
    https://doi.org/10.7554/eLife.78677

    Where the bytes are

    Latest version (always current)
    https://data.nemar.org/nm000363/latest/
    This version (v1.0.0)
    https://data.nemar.org/nm000363/v1.0.0/

    How to download

    The dataset
    nemar dataset download nm000363 Clones and fetches in one step. Content under stimuli/ and derivatives/ is skipped by default because those trees can be large; add --stimuli --derivatives for the whole thing.
    A subset, one step
    nemar dataset download nm000363 --subjects sub-01,02 Also filters by --sessions, --tasks, --runs, --datatypes, --include and --exclude.
    A subset, step 1
    nemar dataset clone nm000363 Clones git-annex pointers only; fetches no file content. Creates ./nm000363.
    A subset, step 2
    cd nm000363 The get command below reads the clone's annex, so it only works from inside the clone.
    A subset, step 3
    nemar dataset get <files> Pulls the files you actually need. Skips stimuli/ and derivatives/ unless the path you ask for is under one of them.
    One small file
    https://data.nemar.org/nm000363/v1.0.0/participants.tsv A direct HTTPS fetch works for any single file.

    Assess fit without downloading

    Participants table
    https://data.nemar.org/nm000363/v1.0.0/participants.tsv
    Dataset description
    https://data.nemar.org/nm000363/v1.0.0/dataset_description.json
    Directory listing
    https://data.nemar.org/nm000363/v1.0.0/?format=json
    Catalog record
    https://api.nemar.org/datasets/nm000363